So, I've been playing through campaign on PS4 and one day when "resuming campaign" it tried to make me replay the "Hypocenter" mission which I had finished earlier. I quit out and went to the next mission "Vengeance" (which was unlocked). I have noticed now, in the mission select screen, that all the missions up to "Hypocenter" have a green box by the name, while the ones I've done after have a grey square with an X. Any time now I try to restart mission the games thing I'm still at "Hypocenter".
Did I screw something up? Anybody know exactly what these boxes mean?
EDIT: Just realized I have not been getting trophies for the missions since Hypocenter.