It does matter. After the epilogue and talking for the last time with the drug dudes there is a hidden video for Sabal or Amita.
You find Sabal on the temple island killing the followers of pagan. I'm still searching for Amitas end sequence; I want to know if she's crazy like Sabal.
Throughout the game I always found Sabal had the better reasons but after all Sabal is just a power hungry lunatic. I'm so curious if Amita is one too.
