I've found myself in a bit of a pickle...I hopped aboard a helicopter ride after a certain quest. Early game spoiler:
It's the helicopter ride you take after you disable the signaling device that's been hacking into your company's computers.
I had a few side-quests that weren't complete yet before hopping onto the helicopter. Are they still going to be completeable after I return? Are there any side-quests that 'expire' if not done in enough time?